Baked Zizi Pizza
Megan, one of the best tasting slices I've ever had was several years ago. Back then it cost me five bucks, but when I tasted it, I realized it was worth every cent. It might be worthy of a visit if you're in the area (and the pie is fresh). BTW, *bonus points* locale too!
Cafe Amore Pizza Restaurant
104 E 14th Street
I don't like this pizzeria because of their attitude and Manhattan-ish prices, but Pizza Royale (part of Vaccaro Ristorante) on Fort Hamilton Parkway & 68th St (bordering Bay Ridge/Dyker Heights) has a nice ziti pizza. A great "quesadilla" pizza, which is nothing more than red onions, chicken, and a different tomato sauce, if you want to try something new. But, the prices are a bit high... unless you're used to eating in Manhattan. Then it's normal.